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Pilonidal Sinus Excision, Flap Repair and Minimally Invasive (Pit-Picking / EPSiT) Surgery

Pilonidal Sinus Surgery in Ireland — Costs, Waiting Times & EU Options

Pilonidal sinus surgery treats a small tunnel in the skin at the top of the buttock crease that can repeatedly become infected. Operations range from minimally invasive techniques to excision with flap repair, and are usually done as a day case.

Duration30–90 minutes
AnaesthesiaGeneral or local anaesthetic
Hospital stayDay case (home same day)
Recovery2–8 weeks
Day caseOften possible
Overview

What is a Pilonidal Sinus Surgery?

A pilonidal sinus is a small channel in the skin of the buttock crease, often containing hair. It’s most common in young adults, particularly men. It can cause painful abscesses and persistent discharge.

Surgery removes the sinus and the tracks under the skin. Options include minimally invasive pit-picking or endoscopic treatment (EPSiT), excision with the wound left open to heal, or excision with an off-midline flap closure, which reduces the chance of the sinus coming back.

Who needs this surgery?

Surgery may be recommended for:

  • Recurrent pilonidal abscesses
  • A sinus that keeps discharging
  • Pain and swelling at the top of the buttocks that keeps coming back

An acute abscess may first need draining, with definitive surgery later.

How the procedure works

Assessment

Your surgeon examines the area to plan the most suitable operation.

Anaesthesia

Usually a general anaesthetic; small procedures can be done under local.

Removing the sinus

The sinus and its tracks are removed or cleaned out.

Closing the wound

The wound may be closed with a flap, left partly open, or packed to heal from the base.

Home

Most people go home the same day.

Your three options

Where can you have a Pilonidal Sinus Surgery?

Compare the public system, private hospitals in Ireland, and HSE-reimbursed treatment in the EU.

Public (HSE)

Free at the point of care with a GP or consultant referral. Waiting times vary widely by hospital, region and clinical urgency; your hospital or the NTPF (ntpf.ie) can tell you where you are on the list.

Private in Ireland

Ask the hospital for a fixed-price quote covering the hospital fee, consultant and anaesthetist fees. Check your health insurance plan for cover, excesses and any approved-hospital list before booking.

Have your surgery in weeks, not years

Under the EU Cross-Border Healthcare Directive, you can be treated in an accredited EU/EEA hospital and claim the cost back from the HSE — with a GP or consultant referral.

Check whether you qualify and what you'd get back.

Check your eligibility

*Reimbursement is capped at the cost of the same treatment in the Irish public health system. Travel, accommodation and any balance above the HSE rate are not covered. Pre-authorisation applies to treatment involving an overnight hospital stay.

€3,581 (day case) – €5,594 (inpatient)Indicative HSE public cost for Pilonidal Sinus Surgery — the reference amount your EU Cross-Border reimbursement is measured against.*
Recovery

Recovering from a Pilonidal Sinus Surgery

First week

Discomfort when sitting is common. Keep the area clean and dry.

Weeks 1–3

Closed wounds heal faster; open wounds need regular dressing changes by a nurse.

Weeks 3–8

Open wounds can take several weeks to heal fully. Avoid sport until healed.

Long term

Keeping the area hair-free may help prevent recurrence.

Safety

Risks and considerations

Possible risks include:

  • Wound infection
  • Slow wound healing or the wound opening
  • The sinus coming back
  • Scarring
  • Numbness around the scar
FAQ

Pilonidal Sinus Surgery — your questions answered

Will my pilonidal sinus come back after surgery?

It can. Off-midline flap closure and minimally invasive techniques can reduce recurrence compared with a midline closure.

How long will I be off work?

Often one to three weeks after closed or minimally invasive procedures; longer after open healing.

Will I be able to sit after surgery?

Sitting may be uncomfortable for a week or two. Cushions can help.

Can I have pilonidal sinus surgery abroad?

Yes, provided it is a treatment the HSE would provide in Ireland, you have a referral, and it is carried out in a public or private healthcare provider in another EU/EEA country. You pay upfront and claim back up to the Irish public cost. Travel and accommodation are not covered.

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Medical disclaimer: This page is for general information only and is not medical advice. Surgery Centre is an independent information and referral service — it is not affiliated with the HSE, the Department of Health or gov.ie. Always consult your GP or a qualified medical professional about your condition, and confirm reimbursement terms directly with the HSE Cross-Border Directive office before travelling for treatment.